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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
100
total RNA-seq
34
single cell RNA-seq
6
WGBS
2
Capture-C
Assay category
134
Transcription
DNA accessibility
6
DNA methylation
Date released
76
February, 2023
38
September, 2020
18
February, 2021
6
May, 2022
2
August, 2021
2
May, 2021
Available data
269
bigWig
186
bam
168
bed narrowPeak
138
fastq
112
tsv
93
zippedFastqFolder
84
tagAlign
63
txt
7
hic
5
bedpe bed3+
4
bed bed3+
3
cool
1
bedpe
1
vcf
Organism
142
Homo sapiens
Biosample type
134
primary cell
6
tissue
2
in vitro differentiated cells
Organ
65
pancreas
59
epithelium
2
connective tissue
Project
132
HPAP
10
AMP
Genome assembly (visualization)
4
hg19
Lab
AMP-T2D consortium
132
Klaus Kaestner, Upenn
8
Kyle Gaulton, UCSD
2
Struan F.A. Grant, CHOP
lab.title!
AMP-T2D consortium
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
142 results
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Clear Filters
total RNA-seq
single cell RNA-seq
WGBS
Capture-C
primary cell
pancreatic alpha cell
42
6
exocrine cell
39
Langerhans cell
34
pancreatic beta cell
11
CD8-positive, alpha-beta T cell
2
tissue
islet of Langerhans
6
in vitro differentiated cells
adipocyte
1
osteoblast
1
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