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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
pCHi-C
13
total RNA-seq
2
ATAC-seq
Assay category
13
Transcription
2
DNA accessibility
Date released
561
February, 2021
189
May, 2020
187
June, 2019
175
May, 2021
164
July, 2018
128
August, 2021
122
August, 2017
69
July, 2019
49
April, 2018
45
March, 2020
26
September, 2018
25
February, 2020
24
October, 2019
20
February, 2023
20
November, 2019
15
December, 2017
15
February, 2018
9
December, 2019
9
November, 2018
5
January, 2019
5
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
2
September, 2017
1
May, 2022
Available data
45
tsv
20
bigWig
16
bam
12
bedpe bed3+
10
hic
3
bed narrowPeak
2
ibed
0
bed bed3+
Organism
45
Homo sapiens
Biosample type
28
tissue
9
cell line
4
in vitro differentiated cells
4
stem cell
Organ
6
pancreas
5
heart
3
epithelium
3
musculature of body
2
blood vessel
2
brain
2
connective tissue
2
intestine
2
kidney
2
liver
2
vasculature
1
adipose tissue
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
43
AMP
2
T1D
Genome assembly (visualization)
15
hg19
13
GRCh38
Lab
45
AMP-T2D consortium
Audit category:
11
inconsistent ontology term
BIOSAMPLE
ASSAY
45 results
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Clear Filters
pCHi-C
total RNA-seq
ATAC-seq
tissue
psoas muscle
1
2
aorta
1
1
heart left ventricle
1
1
heart right ventricle
1
1
liver
1
1
+ See 16 more…
cell line
EndoC_BH1
2
1
early embryonic cell
2
MCF-7
1
RCC 7860 VHL
1
RCC 7860 vector
1
+ See 1 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
embryonic stem cell
1
lymphocyte of B lineage (iPSC)
1
stem cell
mesenchymal stem cell
1
mesendoderm
1
neural progenitor cell (neural stem cell)
1
trophoblast
1
See all biosamples
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