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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
2
DNase-seq
1
Hi-C
1
pCHi-C
Assay category
6
DNA binding
2
DNA accessibility
1
3D chromatin structure
Target of assay
3
histone
3
histone modification
2
narrow histone mark
2
transcription factor
1
broad histone mark
1
control
Date released
3
August, 2017
3
August, 2021
November, 2018
2
June, 2019
1
February, 2021
1
July, 2019
Available data
628
bam
570
bigWig
412
fastq
390
bed narrowPeak
307
bigBed narrowPeak
174
tsv
86
tagAlign
60
bed broadPeak
60
bigBed broadPeak
10
bed bed3+
3
tar
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
10
Homo sapiens
Biosample type
6
primary cell
3
tissue
1
cell line
Organ
78
kidney
36
limb
34
musculature of body
33
brain
30
heart
27
pancreas
26
connective tissue
21
epithelium
18
ureter
13
vasculature
11
blood vessel
10
liver
5
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
Project
10
AMP
Genome assembly (visualization)
10
hg19
8
GRCh38
Lab
10
AMP-T2D consortium
month_released!
November, 2018
BIOSAMPLE
ASSAY
10 results
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Clear Filters
ChIP-seq
DNase-seq
Hi-C
pCHi-C
primary cell
hepatocyte
3
1
endothelial cell of hepatic sinusoid
1
hepatic stellate cell
1
tissue
liver
3
cell line
HepG2
1
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