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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
ChIP-seq
7
DNase-seq
1
Hi-C
Assay category
49
DNA binding
7
DNA accessibility
1
3D chromatin structure
Target of assay
40
histone
40
histone modification
40
narrow histone mark
9
control
Date released
187
June, 2019
118
August, 2017
92
May, 2021
78
November, 2017
57
October, 2019
50
May, 2020
26
August, 2021
15
December, 2017
14
October, 2017
10
February, 2021
9
November, 2018
4
February, 2023
4
July, 2019
2
September, 2017
1
May, 2022
1
November, 2020
Available data
250
bam
207
bigWig
189
bed narrowPeak
70
bigBed narrowPeak
49
tagAlign
16
tsv
9
bed broadPeak
9
bigBed broadPeak
8
bed bed3+
4
hic
3
bedpe bed3+
1
hdf5
1
tagAlign bed3+
1
tar
Organism
57
Homo sapiens
Biosample type
53
tissue
2
cell line
2
primary cell
Organ
38
brain
4
blood vessel
4
limb
4
vasculature
2
artery
2
epithelium
2
nerve
2
pancreas
2
vein
1
pituitary gland
Project
57
AMP
Genome assembly (visualization)
48
GRCh38
48
hg19
Lab
57
AMP-T2D consortium
Audit category:
1
inconsistent assembly
BIOSAMPLE
ASSAY
57 results
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ChIP-seq
DNase-seq
Hi-C
tissue
angular gyrus
2
central medial thalamic nucleus
2
cerebellum (Hemisphere)
2
gyrus rectus
2
medial globus pallidus
2
+ See 36 more…
cell line
Panc1
1
1
primary cell
endothelial cell of umbilical vein
2
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