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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
DNase-seq
1
Hi-C
Assay category
16
DNA accessibility
1
3D chromatin structure
Date released
187
June, 2019
33
August, 2017
15
December, 2017
9
November, 2018
8
October, 2019
5
August, 2021
4
February, 2023
4
July, 2019
2
February, 2021
2
May, 2021
2
September, 2017
1
May, 2022
1
November, 2020
Available data
337
bam
287
bigWig
262
bed narrowPeak
143
bigBed narrowPeak
88
fastq
49
tagAlign
18
bed broadPeak
18
bigBed broadPeak
17
bed bed3+
16
tsv
7
bed bedMethyl
7
bigBed bedMethyl
4
hic
3
bedpe bed3+
1
csv
1
hdf5
1
tagAlign bed3+
1
tar
Organism
17
Homo sapiens
Biosample type
13
tissue
2
cell line
2
primary cell
Organ
4
blood vessel
4
limb
4
pancreas
4
vasculature
3
liver
2
artery
2
brain
2
epithelium
2
nerve
2
vein
1
adipose tissue
1
connective tissue
1
spleen
Project
17
AMP
Genome assembly (visualization)
17
GRCh38
17
hg19
Lab
17
AMP-T2D consortium
Audit category:
1
inconsistent assembly
BIOSAMPLE
ASSAY
17 results
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Clear Filters
DNase-seq
Hi-C
tissue
body of pancreas
2
brain
2
liver
2
tibial artery
2
tibial nerve
2
+ See 3 more…
cell line
Panc1
1
1
primary cell
endothelial cell of umbilical vein
2
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