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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
5
Hi-C
Assay category
9
DNA accessibility
5
3D chromatin structure
Date released
5
June, 2019
5
October, 2019
2
July, 2019
2
March, 2020
Available data
180
bam
150
bigWig
129
bed narrowPeak
79
bigBed narrowPeak
68
tsv
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
6
tagAlign
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
14
Homo sapiens
Biosample type
8
primary cell
6
tissue
Organ
79
kidney
36
limb
36
musculature of body
36
pancreas
35
brain
33
heart
27
connective tissue
27
epithelium
18
ureter
16
vasculature
15
liver
14
blood vessel
adipose tissue
4
artery
4
eye
4
vein
3
embryo
2
nerve
1
spleen
Project
14
AMP
Genome assembly (visualization)
13
hg19
9
GRCh38
Lab
14
AMP-T2D consortium
Audit category:
1
audit script error
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
14 results
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DNase-seq
Hi-C
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
1
endothelial cell of hepatic sinusoid
1
kidney capillary endothelial cell
1
tissue
coronary artery
2
tibial artery
2
aorta
1
ascending aorta
1
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