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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
5
DNase-seq
4
ATAC-seq
2
Capture-C
1
pCHi-C
Assay category
9
DNA accessibility
7
DNA binding
Target of assay
6
transcription factor
1
control
Date released
7
August, 2017
4
February, 2023
4
June, 2019
2
August, 2021
1
February, 2021
1
November, 2020
Available data
150
bam
143
bigWig
77
tsv
61
bed narrowPeak
57
fastq
19
bed bed3+
17
bigBed narrowPeak
14
tagAlign
6
bed bed3
6
bed broadPeak
6
bigBed broadPeak
4
bed bedgraph
1
bed bedMethyl
1
bigBed bedMethyl
Organism
19
Homo sapiens
Biosample type
13
in vitro differentiated cells
6
primary cell
Organ
78
kidney
36
limb
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
11
blood vessel
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
19
AMP
Genome assembly (visualization)
18
hg19
12
GRCh38
Lab
17
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
3
inconsistent ontology term
Audit category:
4
inconsistent control read length
organ_slims!
adipose tissue
brain
BIOSAMPLE
ASSAY
19 results
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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
Capture-C
pCHi-C
in vitro differentiated cells
adipocyte
7
1
1
immature adipocyte
2
osteoblast
1
preadipocyte
1
primary cell
cardiac fibroblast
3
osteoblast
1
1
hepatic stellate cell
1
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