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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ChIP-seq
2
Capture-C
Assay category
36
DNA binding
Target of assay
19
transcription factor
15
histone
15
histone modification
8
narrow histone mark
7
broad histone mark
2
RNA binding protein
2
control
Date released
157
June, 2019
33
August, 2017
15
December, 2017
9
November, 2018
8
October, 2019
5
August, 2021
4
February, 2023
4
July, 2019
2
February, 2021
2
May, 2021
2
September, 2017
1
May, 2022
1
November, 2020
Available data
331
bam
319
bigWig
287
fastq
248
bed narrowPeak
120
tsv
109
tagAlign
64
xls
57
txt
42
bigBed narrowPeak
41
bed broadPeak
38
bed bed3+
15
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
2
bedpe bed3+
2
hic
1
vcf
Organism
38
Homo sapiens
Biosample type
26
tissue
9
in vitro differentiated cells
3
primary cell
Organ
19
pancreas
13
connective tissue
6
liver
4
adipose tissue
3
epithelium
Project
38
AMP
Genome assembly (visualization)
38
hg19
36
GRCh38
Lab
36
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
14
missing controlled_by
Audit category:
4
inconsistent control read length
organ_slims!
heart
BIOSAMPLE
ASSAY
38 results
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Clear Filters
ChIP-seq
Capture-C
tissue
islet of Langerhans
19
white adipose tissue
4
liver
3
in vitro differentiated cells
adipocyte
7
1
osteoblast
1
primary cell
hepatocyte
3
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