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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
DNase-seq
3
ChIP-seq
2
Capture-C
1
Hi-C
Assay category
7
DNA accessibility
3
DNA binding
1
3D chromatin structure
Target of assay
3
histone
3
histone modification
2
narrow histone mark
1
broad histone mark
Date released
157
June, 2019
33
August, 2017
15
December, 2017
9
November, 2018
8
October, 2019
5
August, 2021
4
February, 2023
4
July, 2019
2
February, 2021
2
May, 2021
2
September, 2017
1
May, 2022
1
November, 2020
Available data
292
bam
290
bed narrowPeak
247
bigWig
73
tagAlign
70
bigBed narrowPeak
64
xls
57
txt
45
tsv
13
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
5
hic
4
bedpe bed3+
1
hdf5
1
tagAlign bed3+
1
tar
1
vcf
Organism
13
Homo sapiens
Biosample type
5
primary cell
4
tissue
2
cell line
2
in vitro differentiated cells
Organ
5
epithelium
4
blood vessel
4
limb
4
vasculature
3
liver
2
artery
2
connective tissue
2
nerve
2
pancreas
2
vein
Project
13
AMP
Genome assembly (visualization)
13
hg19
11
GRCh38
Lab
11
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent assembly
organ_slims!
heart
BIOSAMPLE
ASSAY
13 results
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Clear Filters
DNase-seq
ChIP-seq
Capture-C
Hi-C
primary cell
hepatocyte
3
endothelial cell of umbilical vein
2
tissue
tibial artery
2
tibial nerve
2
cell line
Panc1
1
1
in vitro differentiated cells
adipocyte
1
osteoblast
1
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