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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
DNase-seq
3
Hi-C
Assay category
30
DNA accessibility
3
3D chromatin structure
Date released
30
June, 2019
3
July, 2019
Available data
243
bam
222
bigWig
203
bed narrowPeak
127
bigBed narrowPeak
118
tagAlign
47
bed broadPeak
38
bigBed broadPeak
35
bed bed3+
26
tsv
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
33
Homo sapiens
Biosample type
25
tissue
8
primary cell
Organ
78
kidney
36
limb
34
musculature of body
33
brain
30
heart
21
epithelium
18
ureter
15
connective tissue
13
vasculature
11
blood vessel
7
liver
6
pancreas
4
artery
4
eye
2
nerve
2
vein
adipose tissue
Project
33
AMP
Genome assembly (visualization)
30
GRCh38
23
hg19
Lab
33
AMP-T2D consortium
files.file_type!
fastq
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
33 results
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DNase-seq
Hi-C
tissue
brain
12
frontal cortex
2
Ammon's horn
1
caudate nucleus
1
cerebellar cortex
1
+ See 8 more…
primary cell
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
brain pericyte
1
1
astrocyte of the hippocampus
1
choroid plexus epithelial cell
1
See all biosamples
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