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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
DNase-seq
4
ChIP-seq
3
Hi-C
Assay category
34
DNA accessibility
4
DNA binding
3
3D chromatin structure
Target of assay
4
transcription factor
Date released
31
June, 2019
4
August, 2017
3
July, 2019
3
November, 2018
Available data
685
bam
647
bigWig
427
tsv
216
bed narrowPeak
137
bigBed narrowPeak
126
tagAlign
65
fastq
50
bed broadPeak
41
bed bed3+
40
bigBed broadPeak
4
bed bedMethyl
4
bigBed bedMethyl
3
hdf5
1
bed bed3
1
bedpe bed3+
1
tagAlign bed3+
Organism
41
Homo sapiens
Biosample type
33
tissue
8
primary cell
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
41
AMP
Genome assembly (visualization)
38
GRCh38
31
hg19
Lab
41
AMP-T2D consortium
Audit category:
4
missing controlled_by
BIOSAMPLE
ASSAY
41 results
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DNase-seq
ChIP-seq
Hi-C
tissue
brain
14
white adipose tissue
4
frontal cortex
2
omental fat pad
2
Ammon's horn
1
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primary cell
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
brain pericyte
1
1
astrocyte of the hippocampus
1
choroid plexus epithelial cell
1
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