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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
DNase-seq
3
Hi-C
Assay category
68
DNA accessibility
3
3D chromatin structure
Date released
62
June, 2019
4
October, 2019
3
July, 2019
2
November, 2018
Available data
357
bam
313
bigWig
295
bed narrowPeak
211
bigBed narrowPeak
118
tagAlign
83
bed broadPeak
74
bigBed broadPeak
71
bed bed3+
33
tsv
21
fastq
3
bed bedMethyl
3
bigBed bedMethyl
3
hdf5
1
bed bed3
1
tagAlign bed3+
Organism
71
Homo sapiens
Biosample type
63
tissue
8
primary cell
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
71
AMP
Genome assembly (visualization)
68
GRCh38
61
hg19
Lab
71
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
71 results
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DNase-seq
Hi-C
tissue
muscle of arm
17
brain
14
muscle of leg
13
frontal cortex
2
tibial artery
2
+ See 14 more…
primary cell
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
brain pericyte
1
1
astrocyte of the hippocampus
1
choroid plexus epithelial cell
1
See all biosamples
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