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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
DNase-seq
6
ChIP-seq
4
Hi-C
1
pCHi-C
Assay category
37
DNA accessibility
6
DNA binding
4
3D chromatin structure
Target of assay
3
histone
3
histone modification
2
narrow histone mark
2
transcription factor
1
broad histone mark
1
control
Date released
32
June, 2019
5
November, 2018
4
July, 2019
3
August, 2017
3
August, 2021
1
February, 2021
Available data
924
bam
844
bigWig
644
bed narrowPeak
486
fastq
485
bigBed narrowPeak
204
tagAlign
200
tsv
110
bed broadPeak
101
bigBed broadPeak
48
bed bed3+
5
bed bedMethyl
5
bigBed bedMethyl
4
hdf5
3
tar
2
bed bed3
2
bedpe bed3+
2
hic
1
csv
1
tagAlign bed3+
1
vcf
Organism
48
Homo sapiens
Biosample type
33
tissue
14
primary cell
1
cell line
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
48
AMP
Genome assembly (visualization)
43
GRCh38
38
hg19
Lab
48
AMP-T2D consortium
BIOSAMPLE
ASSAY
48 results
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DNase-seq
ChIP-seq
Hi-C
pCHi-C
tissue
brain
14
liver
2
3
frontal cortex
2
Ammon's horn
1
caudate nucleus
1
+ See 10 more…
primary cell
hepatocyte
1
3
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
brain pericyte
1
1
astrocyte of the hippocampus
1
+ See 3 more…
cell line
HepG2
1
See all biosamples
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