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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
DNase-seq
6
ChIP-seq
1
pCHi-C
Assay category
37
DNA accessibility
6
DNA binding
3D chromatin structure
Target of assay
3
histone
3
histone modification
2
narrow histone mark
2
transcription factor
1
broad histone mark
1
control
Date released
32
June, 2019
5
November, 2018
3
August, 2017
3
August, 2021
1
February, 2021
Available data
924
bam
840
bigWig
644
bed narrowPeak
485
bigBed narrowPeak
485
fastq
204
tagAlign
200
tsv
110
bed broadPeak
101
bigBed broadPeak
44
bed bed3+
5
bed bedMethyl
5
bigBed bedMethyl
3
tar
2
bed bed3
1
csv
1
tagAlign bed3+
1
vcf
Organism
44
Homo sapiens
Biosample type
33
tissue
10
primary cell
1
cell line
Organ
78
kidney
36
limb
34
musculature of body
32
brain
30
heart
28
pancreas
26
connective tissue
19
epithelium
18
ureter
12
liver
11
vasculature
9
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
44
AMP
Genome assembly (visualization)
43
GRCh38
34
hg19
Lab
44
AMP-T2D consortium
assay_slims!
3D chromatin structure
BIOSAMPLE
ASSAY
44 results
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Clear Filters
DNase-seq
ChIP-seq
pCHi-C
tissue
brain
14
liver
2
3
frontal cortex
2
Ammon's horn
1
caudate nucleus
1
+ See 10 more…
primary cell
hepatocyte
1
3
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
brain pericyte
1
+ See 2 more…
cell line
HepG2
1
See all biosamples
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