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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
2
DNase-seq
Assay category
3
DNA binding
2
DNA accessibility
Target of assay
2
histone
2
histone modification
1
broad histone mark
1
control
1
narrow histone mark
Date released
3
December, 2017
2
October, 2019
Available data
56
bam
44
bigWig
27
bed narrowPeak
27
fastq
14
tsv
13
bigBed narrowPeak
5
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
2
hic
1
bedpe bed3+
1
tar
Organism
5
Homo sapiens
Biosample type
3
in vitro differentiated cells
2
primary cell
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
5
AMP
Genome assembly (visualization)
5
GRCh38
5
hg19
Lab
5
AMP-T2D consortium
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
5 results
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ChIP-seq
DNase-seq
in vitro differentiated cells
pancreatic endoderm
3
primary cell
endothelial cell of umbilical vein
2
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