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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
DNase-seq
2
Hi-C
Assay category
15
DNA accessibility
2
3D chromatin structure
Date released
11
June, 2019
4
October, 2019
2
July, 2019
Available data
192
bam
166
bed narrowPeak
161
bigWig
89
bigBed narrowPeak
73
tsv
21
bed broadPeak
21
bigBed broadPeak
17
bed bed3+
6
fastq
6
tagAlign
3
bed bedMethyl
3
bigBed bedMethyl
3
hic
2
bedpe bed3+
2
hdf5
1
tar
Organism
17
Homo sapiens
Biosample type
9
primary cell
8
tissue
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
29
pancreas
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
17
AMP
Genome assembly (visualization)
16
hg19
15
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
17 results
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DNase-seq
Hi-C
primary cell
brain microvascular endothelial cell
1
1
endothelial cell of umbilical vein
2
choroid plexus epithelial cell
1
endothelial cell of hepatic sinusoid
1
kidney capillary endothelial cell
1
+ See 2 more…
tissue
retina
3
coronary artery
2
tibial artery
2
ascending aorta
1
See all biosamples
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