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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
3
DNase-seq
1
Hi-C
1
pCHi-C
Assay category
6
DNA binding
3
DNA accessibility
1
3D chromatin structure
Target of assay
3
histone
3
histone modification
2
narrow histone mark
2
transcription factor
1
broad histone mark
1
control
Date released
3
August, 2017
3
August, 2021
3
November, 2018
June, 2019
1
February, 2021
1
July, 2019
Available data
679
bam
620
bigWig
465
fastq
439
bed narrowPeak
356
bigBed narrowPeak
174
tsv
86
tagAlign
61
bed broadPeak
61
bigBed broadPeak
11
bed bed3+
3
bed bedMethyl
3
bigBed bedMethyl
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
11
Homo sapiens
Biosample type
6
tissue
4
primary cell
1
cell line
Organ
25
pancreas
21
connective tissue
11
liver
7
epithelium
6
blood vessel
6
vasculature
5
adipose tissue
5
brain
4
limb
3
embryo
2
artery
2
nerve
2
vein
1
musculature of body
1
spleen
Project
11
AMP
Genome assembly (visualization)
11
hg19
9
GRCh38
Lab
11
AMP-T2D consortium
month_released!
June, 2019
BIOSAMPLE
ASSAY
11 results
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ChIP-seq
DNase-seq
Hi-C
pCHi-C
tissue
liver
3
2
right lobe of liver
1
primary cell
hepatocyte
3
endothelial cell of hepatic sinusoid
1
cell line
HepG2
1
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