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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
DNase-seq
2
Hi-C
1
RRBS
1
WGBS
Assay category
11
DNA accessibility
2
3D chromatin structure
2
DNA methylation
Date released
7
June, 2019
4
July, 2019
4
October, 2019
Available data
185
bam
155
bigWig
133
bed narrowPeak
83
bigBed narrowPeak
68
tsv
17
bed broadPeak
17
bigBed broadPeak
13
bed bed3+
6
fastq
6
tagAlign
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
15
Homo sapiens
Biosample type
9
primary cell
6
tissue
Organ
82
kidney
38
heart
38
musculature of body
37
brain
37
limb
35
pancreas
30
connective tissue
27
epithelium
18
ureter
16
liver
15
vasculature
12
blood vessel
8
adipose tissue
5
eye
4
artery
3
embryo
3
spleen
2
nerve
2
vein
1
pericardium
Project
15
AMP
Genome assembly (visualization)
13
hg19
12
GRCh38
Lab
15
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
15 results
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DNase-seq
Hi-C
RRBS
WGBS
primary cell
brain microvascular endothelial cell
1
1
choroid plexus epithelial cell
1
1
endothelial cell of umbilical vein
2
endothelial cell of hepatic sinusoid
1
kidney capillary endothelial cell
1
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tissue
coronary artery
2
tibial artery
2
aorta
1
ascending aorta
1
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