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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
Assay category
11
DNA binding
Target of assay
68
transcription factor
55
histone
55
histone modification
broad histone mark
27
narrow histone mark
11
RNA binding protein
9
control
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
7
November, 2017
4
August, 2017
Available data
106
bigWig
105
bed narrowPeak
103
bam
93
bigBed narrowPeak
89
fastq
9
bed broadPeak
9
bigBed broadPeak
2
bed bed3+
1
tar
Organism
11
Homo sapiens
Biosample type
5
primary cell
4
cell line
2
tissue
Organ
4
liver
3
brain
2
epithelium
2
pancreas
2
vasculature
1
blood vessel
Project
11
AMP
Genome assembly (visualization)
11
hg19
9
GRCh38
Lab
11
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
11 results
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ChIP-seq
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
cell line
HepG2
4
tissue
islet of Langerhans
2
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