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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
DNase-seq
5
ChIP-seq
1
Hi-C
1
pCHi-C
Assay category
7
DNA accessibility
5
DNA binding
1
3D chromatin structure
Target of assay
3
histone
3
histone modification
2
narrow histone mark
2
transcription factor
1
broad histone mark
control
Date released
3
August, 2021
3
November, 2018
2
August, 2017
2
June, 2019
2
October, 2019
1
February, 2021
1
July, 2019
Available data
640
bigWig
611
bam
468
bed narrowPeak
388
fastq
384
bigBed narrowPeak
179
tsv
65
bed broadPeak
65
bigBed broadPeak
58
tagAlign
14
bed bed3+
3
bed bedMethyl
3
bigBed bedMethyl
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
14
Homo sapiens
Biosample type
7
tissue
6
primary cell
1
cell line
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
27
pancreas
26
connective tissue
21
epithelium
18
ureter
13
vasculature
12
liver
11
blood vessel
6
adipose tissue
4
artery
4
eye
2
embryo
2
nerve
2
vein
1
spleen
Project
14
AMP
Genome assembly (visualization)
14
hg19
12
GRCh38
Lab
14
AMP-T2D consortium
target.investigated_as!
control
BIOSAMPLE
ASSAY
14 results
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Clear Filters
DNase-seq
ChIP-seq
Hi-C
pCHi-C
tissue
liver
2
2
tibial nerve
2
right lobe of liver
1
primary cell
hepatocyte
1
3
endothelial cell of hepatic sinusoid
1
hepatic stellate cell
1
cell line
HepG2
1
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