Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
DNase-seq
2
Hi-C
1
ChIP-seq
Assay category
16
DNA accessibility
2
3D chromatin structure
1
DNA binding
Target of assay
3
histone
3
histone modification
narrow histone mark
1
broad histone mark
Date released
14
June, 2019
2
July, 2019
2
October, 2019
1
August, 2021
Available data
268
bam
253
bigWig
229
fastq
156
tsv
103
bed narrowPeak
80
zippedFastqFolder
61
bigBed narrowPeak
20
bed broadPeak
20
bigBed broadPeak
19
bed bed3+
6
bed bedMethyl
6
bigBed bedMethyl
6
hic
5
bedpe bed3+
4
tagAlign
3
cool
2
hdf5
1
tar
Organism
19
Homo sapiens
Biosample type
19
primary cell
Organ
78
kidney
36
limb
35
brain
34
musculature of body
30
heart
26
connective tissue
23
pancreas
19
epithelium
18
ureter
13
vasculature
11
blood vessel
10
liver
6
adipose tissue
4
artery
4
eye
2
embryo
2
nerve
2
vein
1
spleen
Project
19
AMP
Genome assembly (visualization)
17
GRCh38
13
hg19
Lab
19
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
narrow histone mark
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
19 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
Hi-C
ChIP-seq
primary cell
brain microvascular endothelial cell
1
1
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
hepatocyte
1
1
kidney tubule cell
2
+ See 9 more…
See all biosamples
Download