Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
Assay category
32
DNA binding
Target of assay
22
histone
22
histone modification
19
transcription factor
13
broad histone mark
11
chromatin remodeller
narrow histone mark
6
RNA binding protein
1
recombinant protein
Date released
15
November, 2017
7
August, 2017
5
December, 2017
5
November, 2018
Available data
40
bam
40
bigWig
40
fastq
39
bed narrowPeak
23
bigBed narrowPeak
9
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
6
tagAlign
Organism
32
Homo sapiens
Biosample type
20
cell line
8
in vitro differentiated cells
3
tissue
1
stem cell
Organ
20
liver
4
connective tissue
3
pancreas
1
embryo
Project
32
AMP
Genome assembly (visualization)
32
hg19
30
GRCh38
Lab
32
AMP-T2D consortium
Audit category:
5
missing controlled_by
Audit category:
32
inconsistent control read length
8
inconsistent control run_type
3
inconsistent assembly
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
32 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
20
in vitro differentiated cells
adipocyte
4
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
tissue
pancreas
3
stem cell
hESC
1
Download