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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
ChIP-seq
4
ATAC-seq
2
Capture-C
Assay category
5
DNA binding
4
DNA accessibility
Target of assay
5
control
Date released
4
December, 2017
4
February, 2023
2
August, 2021
1
August, 2017
Available data
250
bam
bigWig
131
tsv
108
fastq
92
bed narrowPeak
28
tagAlign
21
bed bed3+
12
bigBed narrowPeak
7
bed bedgraph
7
bedpe bed3+
5
bed bed3
4
hic
3
txt
2
ibed
1
bed broadPeak
1
bigBed broadPeak
Organism
11
Homo sapiens
Biosample type
11
in vitro differentiated cells
4
tissue
1
cell line
1
primary cell
1
stem cell
Organ
7
connective tissue
1
embryo
Project
11
AMP
Genome assembly (visualization)
11
hg19
5
GRCh38
Lab
9
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent ontology term
target.investigated_as!
narrow histone mark
files.file_type!
bigWig
BIOSAMPLE
ASSAY
11 results
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ChIP-seq
ATAC-seq
Capture-C
in vitro differentiated cells
adipocyte
1
1
1
immature adipocyte
2
Posterior foregut
1
definitive endodermal cell
1
osteoblast
1
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