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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ATAC-seq
4
Hi-C
Assay category
10
DNA accessibility
4
3D chromatin structure
Date released
10
February, 2023
4
July, 2019
Available data
433
bam
407
fastq
239
bigWig
200
tsv
185
bed narrowPeak
161
txt
153
zippedFastqFolder
152
tagAlign
44
bigBed narrowPeak
40
bed broadPeak
23
bedpe bed3+
22
hic
19
bed bedMethyl
19
bigBed bedMethyl
18
bigBed broadPeak
15
bed bed3+
10
bed bed3
8
csv
7
bed bedgraph
4
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
vcf
Organism
14
Homo sapiens
Biosample type
5
in vitro differentiated cells
5
tissue
4
primary cell
Organ
6
connective tissue
4
bone element
4
brain
4
skeleton
2
blood vessel
2
epithelium
2
vasculature
1
liver
Project
14
AMP
Genome assembly (visualization)
17
hg19
GRCh38
Lab
14
AMP-T2D consortium
assembly!
GRCh38
BIOSAMPLE
ASSAY
14 results
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ATAC-seq
Hi-C
in vitro differentiated cells
chondrocyte
5
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
pubis
1
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
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