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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
WGBS
11
ATAC-seq
9
RRBS
Assay category
26
DNA methylation
11
DNA accessibility
Date released
14
July, 2019
10
February, 2023
7
November, 2018
5
August, 2017
1
February, 2021
Available data
2783
bam
2516
bigWig
1482
bed narrowPeak
1330
tsv
949
fastq
933
bigBed narrowPeak
298
tagAlign
273
bed broadPeak
236
bed bed3+
236
bigBed broadPeak
161
txt
64
xls
26
bed bedMethyl
26
bigBed bedMethyl
19
bedpe bed3+
17
hic
11
bed bed3
7
bed bedgraph
6
csv
3
tar
2
ibed
1
bedpe
1
hdf5
1
tagAlign bed3+
1
vcf
Organism
37
Homo sapiens
Biosample type
30
tissue
primary cell
5
in vitro differentiated cells
2
cell line
Organ
7
connective tissue
7
heart
6
pancreas
4
bone element
4
skeleton
3
liver
3
musculature of body
2
adipose tissue
2
brain
2
spleen
1
blood vessel
1
kidney
1
limb
1
pericardium
1
vasculature
Project
37
AMP
Genome assembly (visualization)
20
hg19
18
GRCh38
Lab
37
AMP-T2D consortium
Audit category:
1
inconsistent replicate
biosample_type!
primary cell
BIOSAMPLE
ASSAY
37 results
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WGBS
ATAC-seq
RRBS
tissue
heart left ventricle
2
1
pancreas
2
1
adipose tissue
2
body of pancreas
2
brain
1
1
+ See 15 more…
in vitro differentiated cells
chondrocyte
5
cell line
HepG2
1
1
See all biosamples
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