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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ATAC-seq
Assay category
7
DNA accessibility
Date released
5
February, 2023
2
February, 2021
Available data
1301
bam
1203
bigWig
812
fastq
747
bed narrowPeak
481
bigBed narrowPeak
420
tsv
109
bed broadPeak
109
bigBed broadPeak
76
tagAlign
68
bed bed3+
11
bed bedMethyl
11
bigBed bedMethyl
10
bedpe bed3+
8
hic
7
bed bed3
7
bed bedgraph
5
hdf5
4
tar
4
txt
2
csv
2
ibed
1
vcf
Organism
7
Homo sapiens
Biosample type
5
in vitro differentiated cells
tissue
1
cell line
1
primary cell
Organ
6
connective tissue
1
liver
Project
7
AMP
Genome assembly (visualization)
7
hg19
2
GRCh38
Lab
7
AMP-T2D consortium
Audit category:
1
inconsistent replicate
biosample_type!
tissue
BIOSAMPLE
ASSAY
7 results
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ATAC-seq
in vitro differentiated cells
chondrocyte
5
cell line
HepG2
1
primary cell
osteoblast
1
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