Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
1
ATAC-seq
Assay category
4
3D chromatin structure
1
DNA accessibility
Date released
3
October, 2022
1
February, 2021
1
March, 2020
Available data
613
bigWig
609
bam
409
fastq
295
bed narrowPeak
270
tsv
153
zippedFastqFolder
109
bigBed narrowPeak
100
tagAlign
49
bed broadPeak
49
bigBed broadPeak
37
bed bed3+
10
bed bedMethyl
10
bigBed bedMethyl
6
hic
4
bedpe bed3+
4
hdf5
3
cool
csv
1
bed bed3
1
tar
Organism
5
Homo sapiens
Biosample type
15
tissue
12
in vitro differentiated cells
5
primary cell
3
cell line
Organ
4
epithelium
3
pancreas
1
blood vessel
1
connective tissue
1
vasculature
1
vein
Project
3
HPAP
2
AMP
Genome assembly (visualization)
5
hg19
1
GRCh38
Lab
3
Klaus Kaestner, Upenn
2
AMP-T2D consortium
Audit category:
3
audit script error
files.file_type!
csv
BIOSAMPLE
ASSAY
5 results
search-icon
table-tab-icon
Clear Filters
Hi-C
ATAC-seq
primary cell
endothelial cell of umbilical vein
1
osteoblast
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
Download