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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ATAC-seq
1
Hi-C
Assay category
10
DNA accessibility
1
3D chromatin structure
Date released
10
February, 2023
1
March, 2019
Available data
bam
3129
bigWig
1777
bed narrowPeak
1600
tsv
1358
fastq
1042
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
273
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
11
Homo sapiens
Biosample type
6
tissue
5
in vitro differentiated cells
Organ
5
connective tissue
4
bone element
4
skeleton
1
brain
1
pancreas
Project
11
AMP
Genome assembly (visualization)
11
hg19
Lab
10
AMP-T2D consortium
1
Bing Ren, UCSD
files.file_type!
bam
BIOSAMPLE
ASSAY
11 results
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ATAC-seq
Hi-C
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
islet of Langerhans
1
+ See 1 more…
in vitro differentiated cells
chondrocyte
5
See all biosamples
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