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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
total RNA-seq
11
ChIP-seq
7
ATAC-seq
Assay category
13
Transcription
11
DNA binding
7
DNA accessibility
Target of assay
9
histone
9
histone modification
5
broad histone mark
4
narrow histone mark
2
control
Date released
572
February, 2021
392
November, 2017
283
May, 2020
282
August, 2017
277
May, 2021
250
October, 2019
218
June, 2019
164
July, 2018
120
May, 2019
94
December, 2017
87
November, 2018
82
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
10
February, 2023
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
45
tsv
34
bigWig
31
bam
17
fastq
15
bed narrowPeak
14
tagAlign
12
bedpe bed3+
10
hic
6
bigBed narrowPeak
4
bed broadPeak
2
ibed
0
bed bed3
Organism
31
Homo sapiens
Biosample type
24
tissue
5
cell line
2
in vitro differentiated cells
Organ
10
pancreas
9
brain
3
epithelium
2
heart
2
musculature of body
1
adipose tissue
1
blood vessel
1
connective tissue
1
liver
1
spleen
1
vasculature
Project
26
AMP
5
T1D
Genome assembly (visualization)
29
GRCh38
28
hg19
Lab
31
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
Audit category:
3
missing controlled_by
BIOSAMPLE
ASSAY
31 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
tissue
brain
8
body of pancreas
4
islet of Langerhans
2
psoas muscle
2
aorta
1
+ See 7 more…
cell line
EndoC_BH1
2
1
early embryonic cell
2
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
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