Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ATAC-seq
4
Hi-C
Assay category
12
DNA accessibility
4
3D chromatin structure
Date released
10
February, 2023
4
July, 2019
2
February, 2021
October, 2019
Available data
3142
bam
2922
bigWig
1588
bed narrowPeak
1584
tsv
1358
fastq
972
bigBed narrowPeak
349
tagAlign
313
bed broadPeak
276
bigBed broadPeak
265
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
20
bedpe bed3+
19
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
vcf
Organism
16
Homo sapiens
Biosample type
5
in vitro differentiated cells
5
primary cell
5
tissue
1
cell line
Organ
7
connective tissue
4
bone element
4
brain
4
skeleton
2
blood vessel
2
epithelium
2
liver
2
vasculature
Project
16
AMP
Genome assembly (visualization)
16
hg19
2
GRCh38
Lab
16
AMP-T2D consortium
Audit category:
1
inconsistent replicate
month_released!
October, 2019
BIOSAMPLE
ASSAY
16 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
Hi-C
in vitro differentiated cells
chondrocyte
5
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of hepatic sinusoid
1
osteoblast
1
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
pubis
1
cell line
HepG2
1
Download