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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
RRBS
15
WGBS
Assay category
32
DNA methylation
Date released
21
July, 2019
7
November, 2018
4
August, 2017
Available data
2600
bam
2417
bigWig
1690
bed narrowPeak
1246
fastq
1000
bigBed narrowPeak
973
tsv
373
tagAlign
bed broadPeak
273
bigBed broadPeak
243
bed bed3+
153
zippedFastqFolder
76
txt
64
xls
32
bed bedMethyl
32
bigBed bedMethyl
18
hic
15
bedpe bed3+
8
csv
6
bed bed3
4
hdf5
4
tar
3
cool
2
bed bedgraph
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
32
Homo sapiens
Biosample type
23
tissue
8
primary cell
1
cell line
Organ
7
heart
6
pancreas
5
epithelium
4
musculature of body
3
kidney
3
liver
2
adipose tissue
2
brain
connective tissue
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
32
AMP
Genome assembly (visualization)
17
hg19
15
GRCh38
Lab
32
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
files.file_type!
bed broadPeak
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
32 results
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Clear Filters
RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
body of pancreas
2
heart right ventricle
2
skeletal muscle tissue
2
+ See 10 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
kidney epithelial cell
1
renal cortical epithelial cell
1
+ See 3 more…
cell line
HepG2
1
See all biosamples
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