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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
176
DNase-seq
16
WGBS
9
RRBS
Assay category
176
DNA accessibility
25
DNA methylation
Date released
163
June, 2019
15
November, 2018
14
July, 2019
5
August, 2017
4
October, 2019
Available data
1907
bam
1732
bigWig
1076
tsv
944
bed narrowPeak
561
bigBed narrowPeak
377
fastq
238
tagAlign
213
bed broadPeak
205
bed bed3+
176
bigBed broadPeak
157
txt
64
xls
25
bed bedMethyl
25
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
1
tagAlign bed3+
Organism
201
Homo sapiens
Biosample type
201
tissue
60
cell line
59
primary cell
1
in vitro differentiated cells
Organ
69
kidney
37
limb
35
musculature of body
34
heart
28
brain
18
ureter
12
pancreas
6
blood vessel
6
vasculature
4
adipose tissue
4
artery
4
connective tissue
4
liver
3
eye
3
spleen
2
nerve
1
pericardium
Project
201
AMP
Genome assembly (visualization)
192
GRCh38
169
hg19
Lab
201
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
201 results
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Clear Filters
DNase-seq
WGBS
RRBS
tissue
heart
18
1
muscle of arm
17
brain
14
1
kidney
13
1
muscle of leg
13
1
renal cortex interstitium
11
renal pelvis
10
right kidney
10
left kidney
9
body of pancreas
4
2
heart left ventricle
3
2
1
pancreas
2
2
1
left renal cortex interstitium
4
left renal pelvis
4
right renal pelvis
4
heart right ventricle
1
2
liver
2
1
retina
3
right renal cortex interstitium
3
spleen
1
2
adipose tissue
2
coronary artery
2
frontal cortex
2
omental fat pad
2
right atrium auricular region
2
skeletal muscle tissue
2
tibial artery
2
tibial nerve
2
Ammon's horn
1
aorta
1
ascending aorta
1
caudate nucleus
1
cerebellar cortex
1
cerebellum (Hemisphere)
1
forelimb muscle
1
globus pallidus
1
hindlimb muscle
1
inferior parietal cortex
1
islet of Langerhans
1
left cardiac atrium
1
medulla oblongata
1
midbrain
1
middle frontal gyrus
1
occipital lobe
1
pericardium
1
pons
1
putamen
1
right cardiac atrium
1
right lobe of liver
1
superior temporal gyrus
1
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