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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
36
DNase-seq
8
ATAC-seq
1
WGBS
Assay category
48
DNA binding
44
DNA accessibility
1
DNA methylation
Target of assay
48
histone
48
histone modification
34
broad histone mark
14
narrow histone mark
Date released
48
October, 2019
32
June, 2019
6
February, 2021
6
May, 2019
1
July, 2019
Available data
114
bam
92
bed narrowPeak
91
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
93
Homo sapiens
Biosample type
93
tissue
Organ
444
liver
220
pancreas
205
brain
187
kidney
159
heart
157
epithelium
135
vasculature
130
blood vessel
93
limb
78
connective tissue
74
artery
64
musculature of body
54
blood
54
bodily fluid
34
eye
27
nerve
18
ureter
16
spleen
15
adipose tissue
14
embryo
13
vein
8
bone element
8
skeleton
1
pericardium
1
pituitary gland
Project
93
AMP
Genome assembly (visualization)
92
GRCh38
92
hg19
Lab
93
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
93 results
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ChIP-seq
DNase-seq
ATAC-seq
WGBS
tissue
tibial nerve
24
2
1
tibial artery
18
2
1
muscle of leg
6
13
1
muscle of arm
17
distal epiphysis of femur
1
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