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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
RRBS
17
WGBS
8
single cell RNA-seq
Assay category
35
DNA methylation
8
Transcription
Date released
22
July, 2019
8
November, 2018
6
August, 2017
6
February, 2021
1
September, 2018
Available data
3391
bam
3128
bigWig
1777
bed narrowPeak
1599
tsv
1358
fastq
1042
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
273
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
43
Homo sapiens
Biosample type
30
tissue
12
primary cell
1
cell line
Organ
9
kidney
8
heart
6
epithelium
6
pancreas
4
liver
4
musculature of body
3
connective tissue
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
pericardium
Project
43
AMP
Genome assembly (visualization)
18
hg19
17
GRCh38
Lab
43
AMP-T2D consortium
Audit category:
5
audit script error
2
inconsistent ontology term
organ_slims!
pericardium
BIOSAMPLE
ASSAY
43 results
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Clear Filters
RRBS
WGBS
single cell RNA-seq
tissue
kidney
1
5
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
+ See 10 more…
primary cell
pancreatic cell
2
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
+ See 6 more…
cell line
HepG2
1
See all biosamples
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