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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
6
RRBS
Assay category
7
DNA binding
6
DNA methylation
Target of assay
4
histone
4
histone modification
3
narrow histone mark
2
control
1
broad histone mark
1
transcription factor
Date released
6
July, 2019
4
August, 2021
3
May, 2021
Available data
317
bam
301
bigWig
257
fastq
156
tsv
151
bed narrowPeak
80
zippedFastqFolder
76
bigBed narrowPeak
22
bed broadPeak
22
bigBed broadPeak
21
bed bed3+
7
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
6
hic
5
bedpe bed3+
3
cool
2
hdf5
1
tar
Organism
13
Homo sapiens
Biosample type
10
primary cell
3
in vitro differentiated cells
Organ
120
brain
89
liver
25
connective tissue
25
pancreas
19
musculature of body
14
heart
13
epithelium
10
adipose tissue
8
vasculature
7
blood vessel
6
artery
4
kidney
2
spleen
1
eye
1
limb
1
pericardium
1
pituitary gland
Project
13
AMP
Genome assembly (visualization)
11
hg19
5
GRCh38
Lab
13
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
13 results
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ChIP-seq
RRBS
primary cell
hepatocyte
4
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
kidney epithelial cell
1
renal cortical epithelial cell
1
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in vitro differentiated cells
pancreatic PP cell
3
See all biosamples
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