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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
RRBS
15
WGBS
Assay category
33
DNA methylation
Date released
22
July, 2019
7
November, 2018
4
August, 2017
Available data
2949
bam
2703
bigWig
1764
bed narrowPeak
1314
fastq
1198
tsv
1032
bigBed narrowPeak
390
tagAlign
319
bed broadPeak
283
bigBed broadPeak
267
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
23
hic
22
bedpe bed3+
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
33
Homo sapiens
Biosample type
22
tissue
10
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
3
liver
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
pericardium
Project
33
AMP
Genome assembly (visualization)
18
hg19
15
GRCh38
Lab
33
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
adipose tissue
pericardium
BIOSAMPLE
ASSAY
33 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
body of pancreas
2
heart right ventricle
2
skeletal muscle tissue
2
+ See 9 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
cell line
HepG2
1
See all biosamples
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