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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
WGBS
13
RRBS
Assay category
30
DNA methylation
Date released
17
July, 2019
7
November, 2018
6
August, 2017
Available data
3005
bam
2776
bigWig
1550
tsv
1391
bed narrowPeak
1337
fastq
811
bigBed narrowPeak
280
tagAlign
197
bed broadPeak
169
bigBed broadPeak
160
bed bed3+
153
zippedFastqFolder
99
txt
30
bed bedMethyl
30
bigBed bedMethyl
23
bedpe bed3+
22
hic
11
bed bed3
7
bed bedgraph
4
tar
3
cool
3
csv
2
hdf5
2
ibed
1
bedpe
1
vcf
Organism
30
Homo sapiens
Biosample type
23
tissue
6
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
kidney
4
musculature of body
3
connective tissue
3
liver
2
adipose tissue
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
30
AMP
Genome assembly (visualization)
17
GRCh38
13
hg19
Lab
30
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
brain
kidney
BIOSAMPLE
ASSAY
30 results
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WGBS
RRBS
tissue
heart left ventricle
2
1
pancreas
2
1
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 9 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
hepatocyte
1
retinal pigment epithelial cell
1
skeletal muscle cell
1
+ See 1 more…
cell line
HepG2
1
See all biosamples
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