Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
RRBS
13
WGBS
4
Hi-C
Assay category
30
DNA methylation
4
3D chromatin structure
Date released
25
July, 2019
6
August, 2017
3
November, 2018
Available data
2703
bam
2506
bigWig
1563
bed narrowPeak
1183
tsv
951
bigBed narrowPeak
887
fastq
379
tagAlign
301
bed broadPeak
278
bigBed broadPeak
244
bed bed3+
155
txt
73
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
16
bedpe bed3+
16
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
4
tar
2
ibed
1
tagAlign bed3+
1
vcf
Organism
34
Homo sapiens
Biosample type
19
tissue
14
primary cell
1
cell line
Organ
8
epithelium
8
heart
pancreas
5
brain
4
connective tissue
4
kidney
4
liver
4
musculature of body
4
vasculature
3
blood vessel
2
adipose tissue
2
spleen
1
eye
1
limb
1
pericardium
Project
34
AMP
Genome assembly (visualization)
21
hg19
13
GRCh38
Lab
34
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
pancreas
BIOSAMPLE
ASSAY
34 results
search-icon
table-tab-icon
Clear Filters
RRBS
WGBS
Hi-C
tissue
heart left ventricle
1
2
adipose tissue
2
heart right ventricle
2
skeletal muscle tissue
2
spleen
2
+ See 8 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 9 more…
cell line
HepG2
1
See all biosamples
Download