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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
RRBS
13
WGBS
3
ChIP-seq
1
FAIRE-seq
Assay category
30
DNA methylation
3
DNA binding
1
DNA accessibility
Target of assay
3
transcription factor
1
RNA binding protein
Date released
21
July, 2019
6
August, 2017
3
November, 2017
3
November, 2018
1
October, 2019
Available data
2703
bam
2506
bigWig
1563
bed narrowPeak
1183
tsv
951
bigBed narrowPeak
887
fastq
379
tagAlign
301
bed broadPeak
278
bigBed broadPeak
244
bed bed3+
155
txt
73
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
16
bedpe bed3+
16
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
4
tar
2
ibed
1
tagAlign bed3+
1
vcf
Organism
34
Homo sapiens
Biosample type
19
tissue
11
primary cell
4
cell line
Organ
8
heart
7
epithelium
6
liver
pancreas
4
kidney
4
musculature of body
3
connective tissue
3
vasculature
2
adipose tissue
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
1
vein
Project
34
AMP
Genome assembly (visualization)
21
hg19
13
GRCh38
Lab
34
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
pancreas
BIOSAMPLE
ASSAY
34 results
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Clear Filters
RRBS
WGBS
ChIP-seq
FAIRE-seq
tissue
heart left ventricle
1
2
adipose tissue
2
heart right ventricle
2
skeletal muscle tissue
2
spleen
2
+ See 8 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
endothelial cell of umbilical vein
1
epithelial cell of proximal tubule
1
+ See 6 more…
cell line
HepG2
1
3
See all biosamples
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