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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
2
WGBS
1
ChIP-seq
1
RRBS
Assay category
9
DNA accessibility
3
DNA methylation
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
6
June, 2019
4
August, 2017
1
July, 2019
1
November, 2018
1
November, 2020
Available data
593
bam
570
bigWig
478
tsv
101
fastq
75
bed narrowPeak
28
bigBed narrowPeak
27
bed bed3+
22
tagAlign
10
bed broadPeak
9
bigBed broadPeak
6
bed bed3
4
bed bedgraph
3
bed bedMethyl
3
bigBed bedMethyl
1
bedpe bed3+
1
hdf5
Organism
13
Homo sapiens
Biosample type
7
primary cell
5
tissue
1
in vitro differentiated cells
Organ
82
kidney
66
liver
50
musculature of body
49
brain
38
heart
37
limb
28
epithelium
27
pancreas
19
vasculature
18
ureter
14
blood vessel
13
connective tissue
5
adipose tissue
5
eye
4
artery
4
vein
3
spleen
2
nerve
1
pericardium
Project
13
AMP
Genome assembly (visualization)
11
GRCh38
10
hg19
Lab
13
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
13 results
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DNase-seq
WGBS
ChIP-seq
RRBS
primary cell
cardiac fibroblast
3
1
brain pericyte
1
hepatic stellate cell
1
osteoblast
1
tissue
adipose tissue
2
omental fat pad
2
subcutaneous abdominal adipose tissue
1
in vitro differentiated cells
adipocyte
1
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