Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
4
ATAC-seq
Assay category
19
DNA methylation
4
DNA accessibility
Date released
15
July, 2019
4
August, 2017
4
February, 2021
Available data
3392
bam
bigWig
1777
bed narrowPeak
1600
tsv
1358
fastq
1042
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
273
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
23
Homo sapiens
Biosample type
10
primary cell
9
tissue
4
in vitro differentiated cells
Organ
6
epithelium
5
connective tissue
4
kidney
3
musculature of body
2
brain
2
heart
2
liver
2
pancreas
1
eye
1
pericardium
1
vasculature
Project
23
AMP
Genome assembly (visualization)
23
hg19
Lab
23
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
bigWig
BIOSAMPLE
ASSAY
23 results
search-icon
table-tab-icon
Clear Filters
RRBS
ATAC-seq
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
tissue
skeletal muscle tissue
2
brain
1
heart left ventricle
1
islet of Langerhans
1
kidney
1
+ See 3 more…
in vitro differentiated cells
adipocyte
4
See all biosamples
Download