Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
single cell RNA-seq
4
ChIP-seq
1
ATAC-seq
Assay category
7
Transcription
4
DNA binding
1
DNA accessibility
Target of assay
2
control
2
histone
2
histone modification
2
narrow histone mark
Date released
6
July, 2018
4
December, 2017
1
February, 2023
1
June, 2018
Available data
212
bam
192
bigWig
150
tsv
85
txt
63
bed narrowPeak
24
bigBed narrowPeak
11
fastq
7
bedpe bed3+
6
bed bed3+
5
hic
4
bed broadPeak
4
bigBed broadPeak
3
tagAlign
2
bed bedMethyl
2
bigBed bedMethyl
2
ibed
1
bed bedgraph
Organism
12
Homo sapiens
Biosample type
7
primary cell
5
in vitro differentiated cells
Organ
5
epithelium
5
pancreas
4
embryo
Project
12
AMP
Genome assembly (visualization)
10
hg19
9
GRCh38
Lab
11
AMP-T2D consortium
1
Struan F.A. Grant, CHOP
Audit category:
28
inconsistent control
27
audit script error
12
inconsistent ontology term
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
12 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
ChIP-seq
ATAC-seq
primary cell
co-expressing pancreatic endocrine cell
2
unclassified exocrine cell
2
unclassified pancreatic endocrine cell
2
pancreatic acinar cell
1
in vitro differentiated cells
Hepatic endoderm
4
neuron cell of Hypothalamus (neuron)
1
Download