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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
Assay category
29
DNA binding
DNA accessibility
Target of assay
25
histone
25
histone modification
15
broad histone mark
10
narrow histone mark
4
transcription factor
Date released
20
August, 2017
7
November, 2017
2
October, 2019
Available data
3003
bam
2779
bigWig
1586
tsv
1285
bed narrowPeak
1256
fastq
bigBed narrowPeak
398
tagAlign
157
txt
114
bed broadPeak
93
zippedFastqFolder
79
bigBed broadPeak
64
bed bed3+
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
csv
5
hdf5
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
29
Homo sapiens
Biosample type
21
tissue
6
cell line
2
primary cell
Organ
13
musculature of body
6
liver
6
pancreas
2
blood vessel
2
epithelium
2
vasculature
2
vein
1
adipose tissue
1
brain
1
connective tissue
Project
29
AMP
Genome assembly (visualization)
29
hg19
Lab
29
AMP-T2D consortium
Audit category:
2
inconsistent control read length
assay_slims!
DNA accessibility
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
29 results
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Clear Filters
ChIP-seq
tissue
skeletal muscle tissue
13
islet of Langerhans
6
cingulate gyrus
1
subcutaneous abdominal adipose tissue
1
cell line
HepG2
6
primary cell
endothelial cell of umbilical vein
2
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