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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
178
DNase-seq
2
ATAC-seq
Assay category
180
DNA accessibility
93
DNA binding
Date released
163
June, 2019
9
November, 2018
5
October, 2019
1
August, 2017
1
March, 2019
1
October, 2017
Available data
423
bed narrowPeak
275
bam
242
bigWig
189
bigBed narrowPeak
182
bed bed3+
180
bed broadPeak
178
bigBed broadPeak
64
xls
42
fastq
11
bed bed3
7
bed bedgraph
4
txt
2
tsv
Organism
180
Homo sapiens
Biosample type
178
tissue
primary cell
1
cell line
1
in vitro differentiated cells
Organ
68
kidney
36
limb
32
musculature of body
27
brain
27
heart
18
ureter
9
pancreas
5
blood vessel
5
vasculature
4
artery
3
connective tissue
3
eye
3
liver
2
adipose tissue
2
nerve
1
spleen
Project
180
AMP
Genome assembly (visualization)
179
GRCh38
163
hg19
Lab
178
AMP-T2D consortium
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
biosample_type!
primary cell
BIOSAMPLE
ASSAY
180 results
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DNase-seq
ATAC-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 40 more…
cell line
Panc1
1
in vitro differentiated cells
adipocyte
1
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