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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
199
DNase-seq
2
ATAC-seq
Assay category
201
DNA accessibility
112
DNA binding
Date released
187
June, 2019
9
November, 2018
October, 2019
2
August, 2017
1
March, 2019
1
November, 2020
1
October, 2017
Available data
477
bed narrowPeak
374
bam
336
bigWig
229
bigBed narrowPeak
202
bed bed3+
201
bed broadPeak
199
bigBed broadPeak
102
fastq
64
xls
60
zippedFastqFolder
14
tsv
12
bed bed3
7
bed bedgraph
4
txt
Organism
201
Homo sapiens
Biosample type
174
tissue
26
primary cell
1
in vitro differentiated cells
Organ
78
kidney
33
musculature of body
32
brain
32
limb
30
heart
18
ureter
14
epithelium
9
connective tissue
8
pancreas
7
vasculature
5
blood vessel
5
liver
4
eye
2
adipose tissue
2
artery
1
spleen
Project
201
AMP
Genome assembly (visualization)
199
GRCh38
177
hg19
Lab
199
AMP-T2D consortium
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Audit category:
4
inconsistent ontology term
month_released!
October, 2019
BIOSAMPLE
ASSAY
201 results
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Clear Filters
DNase-seq
ATAC-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 38 more…
primary cell
cardiac fibroblast
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
+ See 17 more…
in vitro differentiated cells
adipocyte
1
See all biosamples
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