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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
DNase-seq
2
ATAC-seq
Assay category
108
DNA binding
19
DNA accessibility
Date released
June, 2019
9
November, 2018
5
October, 2019
2
August, 2017
1
March, 2019
1
November, 2020
1
October, 2017
Available data
265
bed narrowPeak
174
bam
125
bigWig
70
fastq
64
xls
28
bigBed narrowPeak
21
zippedFastqFolder
20
bed bed3+
19
bed broadPeak
17
bigBed broadPeak
13
tsv
12
bed bed3
7
bed bedgraph
4
txt
Organism
19
Homo sapiens
Biosample type
15
tissue
2
primary cell
1
cell line
1
in vitro differentiated cells
Organ
5
pancreas
4
blood vessel
4
limb
4
vasculature
3
connective tissue
3
liver
2
artery
2
brain
epithelium
2
nerve
2
vein
1
adipose tissue
1
spleen
Project
19
AMP
Genome assembly (visualization)
18
hg19
17
GRCh38
Lab
17
AMP-T2D consortium
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
month_released!
June, 2019
organ_slims!
epithelium
BIOSAMPLE
ASSAY
19 results
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DNase-seq
ATAC-seq
tissue
body of pancreas
2
brain
2
islet of Langerhans
2
liver
2
tibial artery
2
+ See 4 more…
primary cell
osteoblast
1
skeletal muscle myoblast
1
cell line
Panc1
1
in vitro differentiated cells
adipocyte
1
See all biosamples
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