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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
99
ChIP-seq
Assay category
176
DNA accessibility
99
DNA binding
Target of assay
53
histone
53
histone modification
46
transcription factor
32
broad histone mark
21
narrow histone mark
6
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
58
November, 2017
39
August, 2017
2
October, 2019
Available data
1382
bam
1178
bigWig
1115
bed narrowPeak
839
fastq
707
bigBed narrowPeak
280
tagAlign
99
bed broadPeak
73
bigBed broadPeak
53
bed bed3+
3
tar
Organism
93
Homo sapiens
Biosample type
58
cell line
26
tissue
15
primary cell
Organ
58
liver
brain
13
musculature of body
12
pancreas
6
epithelium
6
vasculature
4
blood vessel
2
vein
1
adipose tissue
1
connective tissue
Project
99
AMP
Genome assembly (visualization)
99
hg19
62
GRCh38
Lab
99
AMP-T2D consortium
Audit category:
13
inconsistent control read length
2
inconsistent assembly
organ_slims!
brain
BIOSAMPLE
ASSAY
99 results
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ChIP-seq
cell line
HepG2
58
tissue
skeletal muscle tissue
13
islet of Langerhans
6
pancreas
6
subcutaneous abdominal adipose tissue
1
primary cell
skeletal muscle myoblast
13
endothelial cell of umbilical vein
2
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