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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
108
ChIP-seq
Assay category
192
DNA accessibility
108
DNA binding
Target of assay
61
histone
61
histone modification
47
transcription factor
34
broad histone mark
27
narrow histone mark
7
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
66
November, 2017
39
August, 2017
3
October, 2017
Available data
1449
bam
1249
bigWig
1188
bed narrowPeak
785
fastq
765
bigBed narrowPeak
391
tagAlign
108
bed broadPeak
73
bigBed broadPeak
50
bed bed3+
3
tar
1
tagAlign bed3+
Organism
102
Homo sapiens
Biosample type
58
cell line
35
tissue
15
primary cell
Organ
58
liver
15
brain
13
musculature of body
12
pancreas
epithelium
6
vasculature
4
blood vessel
2
vein
1
adipose tissue
1
connective tissue
Project
108
AMP
Genome assembly (visualization)
108
hg19
72
GRCh38
Lab
108
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
13
inconsistent control read length
2
inconsistent assembly
organ_slims!
epithelium
BIOSAMPLE
ASSAY
108 results
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ChIP-seq
cell line
HepG2
58
tissue
skeletal muscle tissue
13
islet of Langerhans
6
pancreas
6
brain
3
cingulate gyrus
2
+ See 4 more…
primary cell
skeletal muscle myoblast
13
astrocyte of the cerebellum
2
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