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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
63
ChIP-seq
Assay category
63
DNA binding
Target of assay
63
histone
63
histone modification
49
transcription factor
34
broad histone mark
29
narrow histone mark
9
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
35
August, 2017
23
November, 2017
3
October, 2017
2
October, 2019
Available data
831
bigWig
813
bed narrowPeak
782
bam
388
bigBed narrowPeak
319
tagAlign
227
fastq
63
bed broadPeak
29
bigBed broadPeak
25
bed bed3+
1
tagAlign bed3+
Organism
58
Homo sapiens
Biosample type
34
tissue
15
primary cell
14
cell line
Organ
14
liver
13
musculature of body
12
brain
11
pancreas
4
epithelium
4
vasculature
3
blood vessel
2
vein
1
adipose tissue
1
connective tissue
Project
63
AMP
Genome assembly (visualization)
63
hg19
38
GRCh38
Lab
63
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
11
inconsistent control read length
inconsistent assembly
audit.WARNING.category!
inconsistent assembly
BIOSAMPLE
ASSAY
63 results
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Clear Filters
ChIP-seq
tissue
skeletal muscle tissue
13
islet of Langerhans
6
pancreas
5
brain
3
cingulate gyrus
2
+ See 4 more…
primary cell
skeletal muscle myoblast
10
endothelial cell of umbilical vein
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
cell line
HepG2
14
See all biosamples
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