Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
9
RRBS
1
ATAC-seq
Assay category
21
DNA binding
9
DNA methylation
1
DNA accessibility
Target of assay
21
histone
21
histone modification
12
broad histone mark
9
narrow histone mark
Date released
23
August, 2017
6
July, 2019
1
November, 2017
1
October, 2017
Available data
bam
1772
bigWig
1076
tsv
984
bed narrowPeak
561
bigBed narrowPeak
377
fastq
238
tagAlign
213
bed broadPeak
205
bed bed3+
176
bigBed broadPeak
157
txt
64
xls
25
bed bedMethyl
25
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
1
tagAlign bed3+
Organism
31
Homo sapiens
Biosample type
31
tissue
10
primary cell
Organ
15
musculature of body
9
pancreas
2
brain
1
adipose tissue
1
connective tissue
1
heart
1
kidney
1
liver
1
pericardium
Project
31
AMP
Genome assembly (visualization)
31
hg19
1
GRCh38
Lab
30
AMP-T2D consortium
1
Stephen Parker, UMich
files.file_type!
bam
BIOSAMPLE
ASSAY
31 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
RRBS
ATAC-seq
tissue
skeletal muscle tissue
13
2
islet of Langerhans
6
1
1
brain
1
cingulate gyrus
1
heart left ventricle
1
+ See 5 more…
See all biosamples
Download